Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm26286-201ENSMUST00000104166 134 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm7046-201ENSMUST00000221351 977 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.57□□□□□ -0.72
Hmgn1P18608 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hmgn1P18608 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hmgn1P18608 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm15547-201ENSMUST00000122152 333 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm5982-201ENSMUST00000196234 512 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Rps4l-202ENSMUST00000204242 789 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm5705-201ENSMUST00000066241 711 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Hmgn1P18608 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.56□□□□□ -0.72
Hmgn1P18608 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.56□□□□□ -0.72
Hmgn1P18608 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hmgn1P18608 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hmgn1P18608 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms