Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Gm3890-201ENSMUST00000182416 207 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm18827-201ENSMUST00000188341 790 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Gm28693-202ENSMUST00000190758 331 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.41□□□□□ -0.9
Cdx1P18111 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cdx1P18111 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Cdx1P18111 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.41□□□□□ -0.9
Cdx1P18111 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Cdx1P18111 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cdx1P18111 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cdx1P18111 Gm18227-201ENSMUST00000211082 1468 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cdx1P18111 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.4□□□□□ -0.9
Cdx1P18111 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.4□□□□□ -0.9
Cdx1P18111 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Rgr-203ENSMUST00000225070 4704 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Gm11964-201ENSMUST00000120982 444 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.4□□□□□ -0.9
Cdx1P18111 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cdx1P18111 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.4□□□□□ -0.9
Cdx1P18111 Morn2-202ENSMUST00000227729 656 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Cdx1P18111 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Cdx1P18111 Mir433-201ENSMUST00000093564 124 ntBASIC9.4□□□□□ -0.9
Cdx1P18111 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Cdx1P18111 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Cdx1P18111 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.39□□□□□ -0.91
Cdx1P18111 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx1P18111 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cdx1P18111 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Cdx1P18111 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Cdx1P18111 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.39□□□□□ -0.91
Cdx1P18111 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Cdx1P18111 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms