Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hoxb3P09026 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm12986-201ENSMUST00000119037 967 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm12906-201ENSMUST00000154610 441 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm5706-201ENSMUST00000181525 993 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm9135-201ENSMUST00000182963 990 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm34701-202ENSMUST00000204685 360 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm18968-201ENSMUST00000221319 862 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 AC174797.4-201ENSMUST00000225510 347 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxb3P09026 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.79□□□□□ -0.52
Hoxb3P09026 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxb3P09026 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm37234-201ENSMUST00000193259 1441 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm11663-201ENSMUST00000117888 290 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm15719-201ENSMUST00000120619 635 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm16210-201ENSMUST00000122161 610 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm17070-201ENSMUST00000170463 784 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm20778-201ENSMUST00000178524 627 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm37782-201ENSMUST00000194879 678 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm17838-201ENSMUST00000205872 876 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Gm6390-201ENSMUST00000215034 589 ntBASIC11.78□□□□□ -0.52
Hoxb3P09026 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxb3P09026 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hoxb3P09026 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxb3P09026 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms