Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
ApoeP08226 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
ApoeP08226 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
ApoeP08226 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
ApoeP08226 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
ApoeP08226 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.96□□□□□ -0.66
ApoeP08226 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.96□□□□□ -0.66
ApoeP08226 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
ApoeP08226 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
ApoeP08226 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
ApoeP08226 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
ApoeP08226 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.95□□□□□ -0.66
ApoeP08226 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.95□□□□□ -0.66
ApoeP08226 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Gm37333-201ENSMUST00000192904 2251 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Gm8956-201ENSMUST00000203939 825 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.95□□□□□ -0.66
ApoeP08226 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
ApoeP08226 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.95□□□□□ -0.66
ApoeP08226 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
ApoeP08226 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
ApoeP08226 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
ApoeP08226 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
ApoeP08226 Gm11478-201ENSMUST00000117851 599 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm11511-201ENSMUST00000118146 540 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm11500-201ENSMUST00000118237 601 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm12463-201ENSMUST00000118271 849 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm4986-201ENSMUST00000119731 549 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm13297-201ENSMUST00000120205 934 ntBASIC10.94□□□□□ -0.66
ApoeP08226 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ApoeP08226 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.94□□□□□ -0.66
ApoeP08226 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.94□□□□□ -0.66
ApoeP08226 Gm43118-201ENSMUST00000199149 775 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms