Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P06344 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
P06344 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.34□□□□□ -0.75
P06344 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
P06344 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P06344 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P06344 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P06344 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.33□□□□□ -0.76
P06344 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Gm22920-201ENSMUST00000102175 109 ntBASIC10.33□□□□□ -0.76
P06344 Gm14193-201ENSMUST00000105067 153 ntBASIC10.33□□□□□ -0.76
P06344 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Gm15352-201ENSMUST00000118696 270 ntBASIC10.33□□□□□ -0.76
P06344 Gm11956-201ENSMUST00000119525 512 ntBASIC10.33□□□□□ -0.76
P06344 Gm4726-201ENSMUST00000135604 736 ntBASIC10.33□□□□□ -0.76
P06344 Gm6019-201ENSMUST00000148369 736 ntBASIC10.33□□□□□ -0.76
P06344 Gm15881-201ENSMUST00000148792 942 ntBASIC10.33□□□□□ -0.76
P06344 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.33□□□□□ -0.76
P06344 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.33□□□□□ -0.76
P06344 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.33□□□□□ -0.76
P06344 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
P06344 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.33□□□□□ -0.76
P06344 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.33□□□□□ -0.76
P06344 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.33□□□□□ -0.76
P06344 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.33□□□□□ -0.76
P06344 Gm17831-201ENSMUST00000205579 900 ntBASIC10.33□□□□□ -0.76
P06344 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
P06344 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.33□□□□□ -0.76
P06344 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.33□□□□□ -0.76
P06344 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.33□□□□□ -0.76
P06344 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.33□□□□□ -0.76
P06344 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.33□□□□□ -0.76
P06344 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
P06344 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P06344 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
P06344 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
P06344 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
P06344 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.32□□□□□ -0.76
P06344 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P06344 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
P06344 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
P06344 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Gm11960-201ENSMUST00000122068 925 ntBASIC10.32□□□□□ -0.76
P06344 Gm24844-201ENSMUST00000158679 127 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms