Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.78□□□□□ -0.52
PdgfrbP05622 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
PdgfrbP05622 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PdgfrbP05622 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.77□□□□□ -0.52
PdgfrbP05622 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.77□□□□□ -0.52
PdgfrbP05622 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
PdgfrbP05622 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
PdgfrbP05622 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
PdgfrbP05622 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
PdgfrbP05622 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm23200-201ENSMUST00000104379 132 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm43002-201ENSMUST00000200310 155 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm44251-201ENSMUST00000204963 442 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC11.77□□□□□ -0.53
PdgfrbP05622 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Lect2-202ENSMUST00000225183 823 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.77□□□□□ -0.53
PdgfrbP05622 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PdgfrbP05622 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PdgfrbP05622 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
PdgfrbP05622 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm12266-201ENSMUST00000120311 962 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm17040-202ENSMUST00000170597 889 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Mir8093-201ENSMUST00000185043 137 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm45113-201ENSMUST00000207518 165 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
PdgfrbP05622 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.76□□□□□ -0.53
PdgfrbP05622 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.76□□□□□ -0.53
PdgfrbP05622 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PdgfrbP05622 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.76□□□□□ -0.53
PdgfrbP05622 Gm10288-201ENSMUST00000084614 537 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms