Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.91□□□□□ -0.66
Matn4O89029 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.91□□□□□ -0.66
Matn4O89029 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Gm8343-201ENSMUST00000182705 994 ntBASIC10.91□□□□□ -0.66
Matn4O89029 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.91□□□□□ -0.66
Matn4O89029 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.91□□□□□ -0.66
Matn4O89029 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.91□□□□□ -0.66
Matn4O89029 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Matn4O89029 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Matn4O89029 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Matn4O89029 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.91□□□□□ -0.66
Matn4O89029 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Matn4O89029 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.91□□□□□ -0.66
Matn4O89029 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.9□□□□□ -0.66
Matn4O89029 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm22133-201ENSMUST00000102082 109 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Matn4O89029 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm8062-201ENSMUST00000139696 444 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.9□□□□□ -0.66
Matn4O89029 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.9□□□□□ -0.66
Matn4O89029 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.9□□□□□ -0.66
Matn4O89029 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Matn4O89029 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Matn4O89029 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.9□□□□□ -0.66
Matn4O89029 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Matn4O89029 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms