Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.5□□□□□ -0.57
Pdlim1O70400 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pdlim1O70400 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pdlim1O70400 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Gm14071-201ENSMUST00000117817 509 ntBASIC11.49□□□□□ -0.57
Pdlim1O70400 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.49□□□□□ -0.57
Pdlim1O70400 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Lect2-202ENSMUST00000225183 823 ntBASIC11.49□□□□□ -0.57
Pdlim1O70400 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.49□□□□□ -0.57
Pdlim1O70400 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pdlim1O70400 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.48□□□□□ -0.57
Pdlim1O70400 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.48□□□□□ -0.57
Pdlim1O70400 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Rgr-203ENSMUST00000225070 4704 ntBASIC11.48□□□□□ -0.57
Pdlim1O70400 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.48□□□□□ -0.57
Pdlim1O70400 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.48□□□□□ -0.57
Pdlim1O70400 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pdlim1O70400 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms