Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.3□□□□□ -0.44
Kcnu1O54982 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Kcnu1O54982 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Kcnu1O54982 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Kcnu1O54982 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Kcnu1O54982 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Btrc-209ENSMUST00000224478 2194 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm15515-201ENSMUST00000117827 822 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm12579-201ENSMUST00000118040 783 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm14724-201ENSMUST00000118400 537 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm7150-201ENSMUST00000122032 981 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.29□□□□□ -0.44
Kcnu1O54982 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.29□□□□□ -0.44
Kcnu1O54982 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Kcnu1O54982 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.29□□□□□ -0.44
Kcnu1O54982 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Kcnu1O54982 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Kcnu1O54982 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.28□□□□□ -0.44
Kcnu1O54982 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.28□□□□□ -0.44
Kcnu1O54982 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Kcnu1O54982 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm4978-201ENSMUST00000071565 801 ntBASIC12.28□□□□□ -0.44
Kcnu1O54982 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Kcnu1O54982 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Kcnu1O54982 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Kcnu1O54982 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Kcnu1O54982 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Kcnu1O54982 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms