Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm11475-201ENSMUST00000118482 476 ntBASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Gm8255-201ENSMUST00000218693 305 ntBASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc180J3QNE4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Gm43167-201ENSMUST00000202001 1606 ntBASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Gm5822-201ENSMUST00000161562 1378 ntBASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Gm11996-201ENSMUST00000117538 915 ntBASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Mir432-201ENSMUST00000157230 75 ntBASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Gm4903-201ENSMUST00000210462 405 ntBASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc180J3QNE4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gm12418-201ENSMUST00000118116 942 ntBASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gm9162-201ENSMUST00000182081 991 ntBASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gm18014-201ENSMUST00000183369 817 ntBASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc180J3QNE4 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Nudt13-207ENSMUST00000224311 1574 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25226-201ENSMUST00000158198 123 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23400-201ENSMUST00000174994 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm26463-201ENSMUST00000175065 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm24332-201ENSMUST00000175102 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25959-201ENSMUST00000175112 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm22475-201ENSMUST00000175169 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm22903-201ENSMUST00000175193 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25070-201ENSMUST00000175237 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm24159-201ENSMUST00000175264 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25299-201ENSMUST00000175283 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23798-201ENSMUST00000175560 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23802-201ENSMUST00000175565 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25708-201ENSMUST00000177687 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm24370-201ENSMUST00000178007 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23049-201ENSMUST00000178068 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm28019-201ENSMUST00000178138 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25571-201ENSMUST00000178322 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25355-201ENSMUST00000178456 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm24975-201ENSMUST00000178492 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23189-201ENSMUST00000178954 102 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm25100-201ENSMUST00000179750 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gm23064-201ENSMUST00000179866 101 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC20.83■□□□□ 0.92
Ccdc180J3QNE4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms