Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 AC154354.1-203ENSMUST00000225565 1364 ntBASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hfm1D3Z4R1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Mir1249-201ENSMUST00000116791 98 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm11380-201ENSMUST00000118067 560 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm5944-201ENSMUST00000118182 1001 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm8659-201ENSMUST00000120024 1084 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Mir6359-201ENSMUST00000183668 81 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm42867-201ENSMUST00000202995 469 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm45310-201ENSMUST00000210436 275 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm14005-209ENSMUST00000224993 1832 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hfm1D3Z4R1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Gm4462-201ENSMUST00000166453 492 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Mir8091-201ENSMUST00000183602 139 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Gm7880-201ENSMUST00000203748 871 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 AC121357.1-201ENSMUST00000227365 608 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 AC154213.1-201ENSMUST00000228234 583 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 AC107763.1-201ENSMUST00000226082 1365 ntBASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Hfm1D3Z4R1 Gm22495-201ENSMUST00000104492 126 ntBASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm33707-201ENSMUST00000195135 569 ntBASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm44498-201ENSMUST00000199509 111 ntBASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 AC154436.1-201ENSMUST00000227272 782 ntBASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Hfm1D3Z4R1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms