Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm15515-201ENSMUST00000117827 822 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm11663-201ENSMUST00000117888 290 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm13611-201ENSMUST00000118269 318 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm3543D3Z235 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.54□□□□□ -0.72
Gm3543D3Z235 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3543D3Z235 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm28686-201ENSMUST00000187404 609 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm18893-201ENSMUST00000198416 943 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm8959-201ENSMUST00000213150 571 ntBASIC10.53□□□□□ -0.72
Gm3543D3Z235 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3543D3Z235 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms