Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm8459-201ENSMUST00000162504 760 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm45575-201ENSMUST00000210283 548 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tubb1A2AQ07 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tubb1A2AQ07 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Tubb1A2AQ07 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tubb1A2AQ07 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Tubb1A2AQ07 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Tubb1A2AQ07 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tubb1A2AQ07 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm12196-201ENSMUST00000120954 262 ntBASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm7150-201ENSMUST00000122032 981 ntBASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tubb1A2AQ07 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms