Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.92□□□□□ -0.98
PdfS4R2K0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
PdfS4R2K0 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PdfS4R2K0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm6023-201ENSMUST00000118217 606 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm12036-201ENSMUST00000120008 530 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm9083-201ENSMUST00000120423 819 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm44364-201ENSMUST00000198368 141 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm43179-201ENSMUST00000198797 275 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm43118-201ENSMUST00000199149 775 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm17383-201ENSMUST00000078739 1041 ntBASIC8.91□□□□□ -0.98
PdfS4R2K0 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
PdfS4R2K0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
PdfS4R2K0 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.9□□□□□ -0.98
PdfS4R2K0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Gm45342-201ENSMUST00000210903 1363 ntBASIC8.9□□□□□ -0.98
PdfS4R2K0 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
PdfS4R2K0 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PdfS4R2K0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms