Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm14127-201ENSMUST00000117906 678 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm11960-201ENSMUST00000122068 925 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm38266-201ENSMUST00000194931 421 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm43962-201ENSMUST00000203898 190 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H2afb3S4R1G7 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.46□□□□□ -0.73
H2afb3S4R1G7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.46□□□□□ -0.74
H2afb3S4R1G7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Mir7085-201ENSMUST00000184353 66 ntBASIC10.45□□□□□ -0.74
H2afb3S4R1G7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H2afb3S4R1G7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Gm15004-201ENSMUST00000119192 630 ntBASIC10.44□□□□□ -0.74
H2afb3S4R1G7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms