Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.29□□□□□ -0.6
Cdh17Q9R100 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Gm26448-201ENSMUST00000082446 203 ntBASIC11.29□□□□□ -0.6
Cdh17Q9R100 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.29□□□□□ -0.6
Cdh17Q9R100 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh17Q9R100 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm13996-201ENSMUST00000118456 430 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm26361-201ENSMUST00000158868 186 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm270-201ENSMUST00000223010 976 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.28□□□□□ -0.6
Cdh17Q9R100 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh17Q9R100 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.27□□□□□ -0.6
Cdh17Q9R100 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Btrc-209ENSMUST00000224478 2194 ntBASIC11.27□□□□□ -0.6
Cdh17Q9R100 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Cdh17Q9R100 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdh17Q9R100 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.27□□□□□ -0.61
Cdh17Q9R100 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh17Q9R100 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh17Q9R100 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh17Q9R100 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh17Q9R100 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdh17Q9R100 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms