Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm3096-201ENSMUST00000185770 364 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm38266-201ENSMUST00000194931 421 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lima1Q9ERG0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lima1Q9ERG0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.43□□□□□ -0.58
Lima1Q9ERG0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.43□□□□□ -0.58
Lima1Q9ERG0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Lima1Q9ERG0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms