Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smc3Q9CW03 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.61□□□□□ -0.23
Smc3Q9CW03 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.61□□□□□ -0.23
Smc3Q9CW03 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.61□□□□□ -0.23
Smc3Q9CW03 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.61□□□□□ -0.23
Smc3Q9CW03 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc3Q9CW03 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm25700-201ENSMUST00000177693 110 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 AA914427-201ENSMUST00000193194 1166 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm5982-201ENSMUST00000196234 512 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm17827-201ENSMUST00000211825 742 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm9797-202ENSMUST00000218003 294 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.6□□□□□ -0.23
Smc3Q9CW03 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smc3Q9CW03 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm15276-201ENSMUST00000145953 498 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm4310-201ENSMUST00000177847 889 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Mir8093-201ENSMUST00000185043 137 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm38117-201ENSMUST00000194653 939 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm4157-201ENSMUST00000211647 679 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.59□□□□□ -0.23
Smc3Q9CW03 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smc3Q9CW03 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smc3Q9CW03 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Smc3Q9CW03 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms