Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trim8Q99PJ2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm11989-201ENSMUST00000117240 672 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm11362-201ENSMUST00000118838 850 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm38314-201ENSMUST00000195709 625 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm43822-201ENSMUST00000200285 476 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Olfr284-202ENSMUST00000206647 966 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim8Q99PJ2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm45132-201ENSMUST00000207234 2542 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm29396-201ENSMUST00000185659 716 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trim8Q99PJ2 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trim8Q99PJ2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms