Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.79□□□□□ -0.52
Trem2Q99NH8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Mir877-201ENSMUST00000104738 85 ntBASIC11.79□□□□□ -0.52
Trem2Q99NH8 Gm12579-201ENSMUST00000118040 783 ntBASIC11.79□□□□□ -0.52
Trem2Q99NH8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.79□□□□□ -0.52
Trem2Q99NH8 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.79□□□□□ -0.52
Trem2Q99NH8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trem2Q99NH8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm13916-201ENSMUST00000117368 628 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm15515-201ENSMUST00000117827 822 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm12501-201ENSMUST00000119163 529 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm13461-201ENSMUST00000120980 662 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm8199-201ENSMUST00000121323 823 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm5733-201ENSMUST00000190232 939 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 AU022133-201ENSMUST00000200601 873 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.78□□□□□ -0.52
Trem2Q99NH8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trem2Q99NH8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms