Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm2553-201ENSMUST00000215986 605 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkd1Q99MH6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm13392-201ENSMUST00000117708 150 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm11660-201ENSMUST00000120955 412 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm27516-201ENSMUST00000184237 98 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm32999-201ENSMUST00000192693 562 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rprl1-202ENSMUST00000198476 238 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm43962-201ENSMUST00000203898 190 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm44651-201ENSMUST00000207343 372 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Gm7399-201ENSMUST00000032395 858 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkd1Q99MH6 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms