Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12□□□□□ -0.49
SncaipQ99ME3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12□□□□□ -0.49
SncaipQ99ME3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SncaipQ99ME3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
SncaipQ99ME3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SncaipQ99ME3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SncaipQ99ME3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SncaipQ99ME3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SncaipQ99ME3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm13461-201ENSMUST00000120980 662 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm8815-201ENSMUST00000173809 620 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm25732-201ENSMUST00000175168 60 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm5733-201ENSMUST00000190232 939 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm5714-201ENSMUST00000197343 566 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm43002-201ENSMUST00000200310 155 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.99□□□□□ -0.49
SncaipQ99ME3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
SncaipQ99ME3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm14058-201ENSMUST00000116082 735 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm12579-201ENSMUST00000118040 783 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm11783-201ENSMUST00000119549 885 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm11941-201ENSMUST00000119904 610 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm11450-201ENSMUST00000121144 333 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SncaipQ99ME3 Mir3547-201ENSMUST00000175461 88 ntBASIC11.98□□□□□ -0.49
SncaipQ99ME3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms