Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm11619-201ENSMUST00000117474 237 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm8302-201ENSMUST00000119217 852 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm20414-201ENSMUST00000172918 646 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm5700-201ENSMUST00000191483 989 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm42433-201ENSMUST00000196806 940 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm44216-201ENSMUST00000203942 157 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gm26670-202ENSMUST00000226862 340 ntBASIC12.26□□□□□ -0.45
Clp1Q99LI9 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clp1Q99LI9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm15197-201ENSMUST00000120526 478 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Mir6941-201ENSMUST00000184711 59 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm38314-201ENSMUST00000195709 625 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm42430-201ENSMUST00000197209 616 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm43377-201ENSMUST00000201640 455 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm7525-201ENSMUST00000219425 454 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm18515-201ENSMUST00000219755 797 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm40879-201ENSMUST00000220759 612 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm18065-201ENSMUST00000221395 526 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.25□□□□□ -0.45
Clp1Q99LI9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Clp1Q99LI9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.24□□□□□ -0.45
Clp1Q99LI9 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms