Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm18065-201ENSMUST00000221395 526 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Cstf3Q99LI7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm29615-201ENSMUST00000185371 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28224-201ENSMUST00000186078 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm29001-201ENSMUST00000186177 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28292-201ENSMUST00000186593 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28101-201ENSMUST00000187608 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm29076-201ENSMUST00000187689 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28302-201ENSMUST00000187931 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28646-201ENSMUST00000188220 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28205-201ENSMUST00000189177 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm29032-201ENSMUST00000189797 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm28695-201ENSMUST00000190300 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm37448-201ENSMUST00000192795 697 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cstf3Q99LI7 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cstf3Q99LI7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms