Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga6Q91XY2 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga6Q91XY2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.65□□□□□ -0.55
Pcdhga6Q91XY2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.65□□□□□ -0.55
Pcdhga6Q91XY2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm12036-201ENSMUST00000120008 530 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm44158-201ENSMUST00000203881 505 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Mt1-202ENSMUST00000211807 1085 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm8894-201ENSMUST00000074642 666 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm23680-201ENSMUST00000083162 164 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga6Q91XY2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Gm7722-201ENSMUST00000120646 741 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Rprl1-201ENSMUST00000158050 327 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Gm10731-201ENSMUST00000181171 448 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Gm8531-201ENSMUST00000188319 893 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.63□□□□□ -0.55
Pcdhga6Q91XY2 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms