Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm43916-201ENSMUST00000205062 967 ntBASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm45575-201ENSMUST00000210283 548 ntBASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ddx41Q91VN6 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm15595-201ENSMUST00000120840 961 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Mir7032-201ENSMUST00000185154 79 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm10179-201ENSMUST00000086233 688 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ddx41Q91VN6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm15610-201ENSMUST00000120584 195 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm15881-201ENSMUST00000148792 942 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Gm44551-201ENSMUST00000208804 171 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ddx41Q91VN6 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms