Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb17Q91VD8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdhb17Q91VD8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm14381-201ENSMUST00000122105 414 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm15547-201ENSMUST00000122152 333 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm8885-201ENSMUST00000189382 598 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm44156-201ENSMUST00000203885 1189 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm44869-201ENSMUST00000208836 357 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 AL603630.1-201ENSMUST00000214781 147 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 AC118230.1-201ENSMUST00000220196 656 ntBASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm2788-206ENSMUST00000210463 1338 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb17Q91VD8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm11930-201ENSMUST00000117788 190 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm18588-201ENSMUST00000177308 492 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm19587-201ENSMUST00000191395 545 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm37196-201ENSMUST00000194762 906 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm44603-201ENSMUST00000206820 367 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 BC060293-201ENSMUST00000207005 1104 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb17Q91VD8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms