Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm15198-201ENSMUST00000117283 177 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm5982-201ENSMUST00000196234 512 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.98□□□□□ -0.49
Trim60Q8VI40 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim60Q8VI40 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim60Q8VI40 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm3329-201ENSMUST00000159873 556 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm38117-201ENSMUST00000194653 939 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.97□□□□□ -0.49
Trim60Q8VI40 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim60Q8VI40 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim60Q8VI40 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms