Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm10254-201ENSMUST00000052888 867 ntBASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc9Q8VC31 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm6447-201ENSMUST00000118905 835 ntBASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm29608-201ENSMUST00000190444 463 ntBASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ccdc9Q8VC31 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm38001-201ENSMUST00000192900 3761 ntBASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm5687-201ENSMUST00000118252 640 ntBASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc9Q8VC31 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Gm10531-201ENSMUST00000193527 2303 ntBASIC13.92□□□□□ -0.18
Ccdc9Q8VC31 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms