Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm43179-201ENSMUST00000198797 275 ntBASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Vps39Q8R5L3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm15198-201ENSMUST00000117283 177 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm25890-201ENSMUST00000177643 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm22614-201ENSMUST00000178300 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Mir8093-201ENSMUST00000185043 137 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm18038-201ENSMUST00000197900 485 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm9797-202ENSMUST00000218003 294 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm26448-201ENSMUST00000082446 203 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm22042-201ENSMUST00000082989 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm26110-201ENSMUST00000083971 165 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Vps39Q8R5L3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Vps39Q8R5L3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms