Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Nup35Q8R4R6 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm14644-201ENSMUST00000116671 647 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm13297-201ENSMUST00000120205 934 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm8956-201ENSMUST00000203939 825 ntBASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nup35Q8R4R6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.42□□□□□ -0.9
Nup35Q8R4R6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms