Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Gm6180-201ENSMUST00000065243 498 ntBASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ebf4Q8K4J2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm7722-201ENSMUST00000120646 741 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm8652-201ENSMUST00000181363 964 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm27023-201ENSMUST00000182372 285 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm18584-201ENSMUST00000203098 964 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Nln-205ENSMUST00000224945 2486 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Rims2-204ENSMUST00000226410 3685 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ebf4Q8K4J2 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Ebf4Q8K4J2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Gm12138-201ENSMUST00000122180 951 ntBASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Gm8515-201ENSMUST00000194852 576 ntBASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ebf4Q8K4J2 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms