Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.9□□□□□ -0.5
CopaQ8CIE6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
CopaQ8CIE6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.9□□□□□ -0.51
CopaQ8CIE6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm26286-201ENSMUST00000104166 134 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm3332-201ENSMUST00000189337 928 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm5733-201ENSMUST00000190232 939 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm4482-201ENSMUST00000200876 742 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Gm807-202ENSMUST00000224929 408 ntBASIC11.89□□□□□ -0.51
CopaQ8CIE6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
CopaQ8CIE6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CopaQ8CIE6 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm11509-201ENSMUST00000117358 325 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm11511-201ENSMUST00000118146 540 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm12164-201ENSMUST00000121695 551 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm8343-201ENSMUST00000182705 994 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm4157-201ENSMUST00000211647 679 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.88□□□□□ -0.51
CopaQ8CIE6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CopaQ8CIE6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopaQ8CIE6 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms