Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pdlim5Q8CI51 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm4310-201ENSMUST00000177847 889 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm38117-201ENSMUST00000194653 939 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm5982-201ENSMUST00000196234 512 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Rps4l-202ENSMUST00000204242 789 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm8913-201ENSMUST00000209491 641 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm45331-201ENSMUST00000209868 554 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm270-201ENSMUST00000223010 976 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim5Q8CI51 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm11509-201ENSMUST00000117358 325 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Mir1938-201ENSMUST00000158746 100 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm18038-201ENSMUST00000197900 485 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.66□□□□□ -0.7
Pdlim5Q8CI51 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms