Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lrif1Q8CDD9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm13665-201ENSMUST00000120830 528 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm25890-201ENSMUST00000177643 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm22614-201ENSMUST00000178300 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm3096-201ENSMUST00000185770 364 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm29199-201ENSMUST00000187766 775 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm38314-201ENSMUST00000195709 625 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm18711-201ENSMUST00000199341 750 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm22042-201ENSMUST00000082989 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm26110-201ENSMUST00000083971 165 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Lrif1Q8CDD9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm27046-201ENSMUST00000182160 463 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.47□□□□□ -0.57
Lrif1Q8CDD9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lrif1Q8CDD9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms