Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5733-201ENSMUST00000190232 939 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm43184-201ENSMUST00000197247 542 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm45550-201ENSMUST00000209380 946 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm26448-201ENSMUST00000082446 203 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vps53Q8CCB4 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm18893-201ENSMUST00000198416 943 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm7600-201ENSMUST00000209657 785 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm10752-201ENSMUST00000218348 729 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm807-202ENSMUST00000224929 408 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gm5455-201ENSMUST00000058710 715 ntBASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps53Q8CCB4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Rgr-203ENSMUST00000225070 4704 ntBASIC13.52□□□□□ -0.24
Vps53Q8CCB4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm15881-201ENSMUST00000148792 942 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm9540-201ENSMUST00000188230 478 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps53Q8CCB4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms