Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Rmrp-201ENSMUST00000157463 271 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm7399-201ENSMUST00000032395 858 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.73□□□□□ -0.85
Tsen54Q8C2A2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm9823-201ENSMUST00000051212 327 ntBASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Tsen54Q8C2A2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms