Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm13916-201ENSMUST00000117368 628 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm13263-201ENSMUST00000121271 838 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trub1Q8C0D0 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.95□□□□□ -0.5
Trub1Q8C0D0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm24891-201ENSMUST00000104391 136 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm13035-201ENSMUST00000117496 342 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm12997-201ENSMUST00000120207 640 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm7150-201ENSMUST00000122032 981 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Mir433-201ENSMUST00000093564 124 ntBASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trub1Q8C0D0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trub1Q8C0D0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms