Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp47Q8BY87 CT030170.2-201ENSMUST00000223267 126 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 AC122346.3-201ENSMUST00000223983 306 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Gm8420-201ENSMUST00000097103 598 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Gm45776-201ENSMUST00000212366 1522 ntBASIC16.29■□□□□ 0.2
Usp47Q8BY87 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp47Q8BY87 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm43127-201ENSMUST00000195890 2789 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm12516-201ENSMUST00000120819 385 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Mir6998-201ENSMUST00000183343 64 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm34023-201ENSMUST00000195539 217 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm43163-201ENSMUST00000196571 442 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 AC126257.2-201ENSMUST00000215507 2300 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 AC122860.2-201ENSMUST00000217967 2671 ntBASIC16.28■□□□□ 0.2
Usp47Q8BY87 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp47Q8BY87 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gm9353-201ENSMUST00000200472 604 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gm30671-201ENSMUST00000214898 318 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 CT025553.1-201ENSMUST00000226292 299 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 Lgi3-203ENSMUST00000226548 1001 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gm37931-201ENSMUST00000194686 2866 ntBASIC16.27■□□□□ 0.2
Usp47Q8BY87 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp47Q8BY87 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp47Q8BY87 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Usp47Q8BY87 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms