Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.35□□□□□ -0.43
Trerf1Q8BXJ2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trerf1Q8BXJ2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trerf1Q8BXJ2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trerf1Q8BXJ2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trerf1Q8BXJ2 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm24990-201ENSMUST00000157406 323 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm37466-201ENSMUST00000195692 652 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm8913-201ENSMUST00000209491 641 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trerf1Q8BXJ2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Trerf1Q8BXJ2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trerf1Q8BXJ2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm16570-201ENSMUST00000161951 436 ntBASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trerf1Q8BXJ2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms