Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm6114-201ENSMUST00000182472 968 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.18□□□□□ -0.46
Ccdc40Q8BI79 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm43112-201ENSMUST00000196665 3122 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm14441-201ENSMUST00000121960 540 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm25668-201ENSMUST00000157700 129 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Gm4607-201ENSMUST00000206649 577 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc40Q8BI79 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc40Q8BI79 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms