Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm23745-201ENSMUST00000104230 125 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm14441-201ENSMUST00000121960 540 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm23694-201ENSMUST00000179335 110 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm7627-201ENSMUST00000183205 999 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Mir7035-201ENSMUST00000184713 82 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gm26616-202ENSMUST00000195676 3107 ntBASIC9.73□□□□□ -0.85
Ttc28Q80XJ3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm44605-201ENSMUST00000206892 949 ntBASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm15197-201ENSMUST00000120526 478 ntBASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ttc28Q80XJ3 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms