Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdh8Q7TSK3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm11949-201ENSMUST00000117640 372 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm11783-201ENSMUST00000119549 885 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm23771-201ENSMUST00000178702 110 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh8Q7TSK3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm45219-201ENSMUST00000205602 465 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm6108-201ENSMUST00000208365 367 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh8Q7TSK3 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms