Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdp1Q7TSG2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm24845-201ENSMUST00000158034 109 ntBASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ctdp1Q7TSG2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ctdp1Q7TSG2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ctdp1Q7TSG2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm14832-201ENSMUST00000121289 322 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm13097-201ENSMUST00000210722 397 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm10254-201ENSMUST00000052888 867 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ctdp1Q7TSG2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm23270-201ENSMUST00000104055 131 ntBASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm16570-201ENSMUST00000161951 436 ntBASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm3096-201ENSMUST00000185770 364 ntBASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ctdp1Q7TSG2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms