Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm45598-202ENSMUST00000210719 986 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Smarcd3Q6P9Z1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm14109-201ENSMUST00000118814 309 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm27046-201ENSMUST00000182160 463 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gzmn-202ENSMUST00000225535 989 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm5455-201ENSMUST00000058710 715 ntBASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Smarcd3Q6P9Z1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Smarcd3Q6P9Z1 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms