Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 AC164429.1-201ENSMUST00000224210 518 ntBASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Slx4Q6P1D7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Gm15617-201ENSMUST00000118973 771 ntBASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Gm6758-201ENSMUST00000119643 1055 ntBASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slx4Q6P1D7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slx4Q6P1D7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm8601-201ENSMUST00000182096 909 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm29808-201ENSMUST00000194419 468 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm19918-201ENSMUST00000194858 400 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Nudt13-207ENSMUST00000224311 1574 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm44740-201ENSMUST00000205603 1614 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm42943-201ENSMUST00000199676 3242 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm24933-201ENSMUST00000103762 110 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm23252-201ENSMUST00000103776 110 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm12745-201ENSMUST00000121767 214 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm27826-201ENSMUST00000175282 255 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm26443-201ENSMUST00000179610 110 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm6352-201ENSMUST00000203583 1134 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm10254-201ENSMUST00000052888 867 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Gm6478-201ENSMUST00000099450 742 ntBASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slx4Q6P1D7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slx4Q6P1D7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms