Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC10.56□□□□□ -0.72
VcanQ62059 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.56□□□□□ -0.72
VcanQ62059 Gm23555-201ENSMUST00000157815 135 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC10.56□□□□□ -0.72
VcanQ62059 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VcanQ62059 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
VcanQ62059 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VcanQ62059 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
VcanQ62059 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
VcanQ62059 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm15528-201ENSMUST00000117821 864 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm15476-201ENSMUST00000118247 1191 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm5259-201ENSMUST00000191231 800 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm37597-201ENSMUST00000191853 382 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.56□□□□□ -0.72
VcanQ62059 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.56□□□□□ -0.72
VcanQ62059 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
VcanQ62059 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.55□□□□□ -0.72
VcanQ62059 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
VcanQ62059 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.55□□□□□ -0.72
VcanQ62059 Rp1-202ENSMUST00000194992 858 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
VcanQ62059 Gm44236-201ENSMUST00000204492 513 ntBASIC10.55□□□□□ -0.72
VcanQ62059 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC10.55□□□□□ -0.72
VcanQ62059 Gm22341-201ENSMUST00000083775 129 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gm14997-201ENSMUST00000119232 636 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Gm8659-201ENSMUST00000120024 1084 ntBASIC10.55□□□□□ -0.72
VcanQ62059 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gm17147-201ENSMUST00000164176 432 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.55□□□□□ -0.72
VcanQ62059 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.55□□□□□ -0.72
VcanQ62059 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
VcanQ62059 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 AC124392.1-201ENSMUST00000225172 5324 ntBASIC10.55□□□□□ -0.72
VcanQ62059 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
VcanQ62059 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
VcanQ62059 AC132833.1-202ENSMUST00000228875 1690 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
VcanQ62059 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Gm25148-201ENSMUST00000104611 123 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Gm8302-201ENSMUST00000119217 852 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.54□□□□□ -0.72
VcanQ62059 AC102327.1-201ENSMUST00000226389 742 ntBASIC10.54□□□□□ -0.72
VcanQ62059 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
VcanQ62059 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
VcanQ62059 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 114.4 ms