Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm24891-201ENSMUST00000104391 136 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm15515-201ENSMUST00000117827 822 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Gm11331-201ENSMUST00000119764 288 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm2553-201ENSMUST00000215986 605 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.16□□□□□ -0.62
ClpbQ60649 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.16□□□□□ -0.62
ClpbQ60649 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
ClpbQ60649 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
ClpbQ60649 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.15□□□□□ -0.62
ClpbQ60649 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ClpbQ60649 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm9062-201ENSMUST00000117712 727 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm28686-201ENSMUST00000187404 609 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm2965-201ENSMUST00000198365 343 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Gm4482-201ENSMUST00000200876 742 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.15□□□□□ -0.62
ClpbQ60649 Spcs1-203ENSMUST00000226374 592 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Gm10288-201ENSMUST00000084614 537 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
ClpbQ60649 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.15□□□□□ -0.62
ClpbQ60649 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
ClpbQ60649 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ClpbQ60649 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
ClpbQ60649 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
ClpbQ60649 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
ClpbQ60649 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.15□□□□□ -0.63
ClpbQ60649 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
ClpbQ60649 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
ClpbQ60649 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm11509-201ENSMUST00000117358 325 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Gm14724-201ENSMUST00000118400 537 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Gm11941-201ENSMUST00000119904 610 ntBASIC11.14□□□□□ -0.63
ClpbQ60649 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.14□□□□□ -0.63
ClpbQ60649 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.14□□□□□ -0.63
ClpbQ60649 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
ClpbQ60649 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
ClpbQ60649 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms