Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Snora78-201ENSMUST00000158630 128 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm6013-201ENSMUST00000212264 699 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm7046-201ENSMUST00000221351 977 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.07□□□□□ -0.64
Nr1h4Q60641 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Nr1h4Q60641 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm15824-201ENSMUST00000119516 955 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm26956-201ENSMUST00000182176 986 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm8956-201ENSMUST00000203939 825 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm10254-201ENSMUST00000052888 867 ntBASIC11.06□□□□□ -0.64
Nr1h4Q60641 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.06□□□□□ -0.64
Nr1h4Q60641 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms