Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm270-201ENSMUST00000223010 976 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Lect2-202ENSMUST00000225183 823 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm8385-201ENSMUST00000058999 643 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav5d-4Q5R1F6 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm23596-201ENSMUST00000104304 132 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15207-201ENSMUST00000119259 442 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav5d-4Q5R1F6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav5d-4Q5R1F6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms